The detailed information of tRNA gene sequence


Sequence ID>w018961
Genome IDAATS01000024
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 14844
End posion on genome 14919
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cggccccttc
tRNA gene sequence 
GCCGGCATAGCTCAGTTGGTAGAGCAGCTGATTTGTAATCAGCAGGCCACGGGTTCGAAT
CCTGTTGCCGGCTCCA
Downstream region at tRNA end position 
gttagtcatt
Secondary structure (Cloverleaf model)
>w018961	Thr	TGT
                   c      TCCA gttagtcatt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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