The detailed information of tRNA gene sequence


Sequence ID>w018960
Genome IDAATS01000020
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 6488
End posion on genome 6405
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gggatactac
tRNA gene sequence 
GCCGAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGCTAGTTTCCTTTTGGAAGTG
CTGGTTCGATTCCAGTCCTCGGTAcca
Downstream region at tRNA end position 
acaagaaaga
Secondary structure (Cloverleaf model)
>w018960	Leu	CAG
                   c      Acca acaagaaaga
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TTTCCTTTTGGAAGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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