The detailed information of tRNA gene sequence


Sequence ID>w018958
Genome IDAATS01000017
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 47921
End posion on genome 47997
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaaagctgac
tRNA gene sequence 
GGGCTCATGGCGCAATTGGTTAGCGCAACCGGCTCATAACCGGTTGGTTCTAGGTTCGAG
TCCTAGTGAGCCCACCA
Downstream region at tRNA end position 
cataagaaaa
Secondary structure (Cloverleaf model)
>w018958	Met	CAT
                   c      ACCA cataagaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T A A        G      | | | | |     G
    T       C G C G       C T A G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        A     TGGTT
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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