The detailed information of tRNA gene sequence


Sequence ID>w018956
Genome IDAATS01000011
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 44860
End posion on genome 44784
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ccgcaaagaT
tRNA gene sequence 
GCTCCCATCGTCTAGCGGTTAGGACGCTGGCCTCTCACGCCGGAAACAGGGGTTCGATTC
CCCTTGGGAGTACCA
Downstream region at tRNA end position 
Aaagagaatc
Secondary structure (Cloverleaf model)
>w018956	Glu	CTC
                   T      ACCA Aaagagaatc
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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