The detailed information of tRNA gene sequence


Sequence ID>w018950
Genome IDAATS01000008
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 32699
End posion on genome 32773
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacaccctga
tRNA gene sequence 
CGCGGGGTGGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATC
CGGCCCCCGCAACCA
Downstream region at tRNA end position 
aacaataaag
Secondary structure (Cloverleaf model)
>w018950	Met	CAT
                   a      ACCA aacaataaag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
        G A        G      | + | | |     A
      T     C G A G       G T C G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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