The detailed information of tRNA gene sequence


Sequence ID>w018947
Genome IDAATS01000006
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 64742
End posion on genome 64651
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagggataT
tRNA gene sequence 
GGAGAGATGTCTGAGCGGTCGAAGGAGCACGCCTGGAAAGCGTGTGTACGTGAAAGCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
Gtttaaacga
Secondary structure (Cloverleaf model)
>w018947	Ser	GGA
                   T      GCCA Gtttaaacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    T       A G G A
      C G A        G     TGTACGTGAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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