The detailed information of tRNA gene sequence


Sequence ID>w018943
Genome IDAATS01000005
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 156988
End posion on genome 156911
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtccatacT
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTATCCTCCACCA
Downstream region at tRNA end position 
Gttttggtgt
Secondary structure (Cloverleaf model)
>w018943	Ala	TGC
                   T      ACCA Gttttggtgt
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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