The detailed information of tRNA gene sequence


Sequence ID>w018939
Genome IDAATS01000004
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 7957
End posion on genome 7868
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttaataaaaC
tRNA gene sequence 
GGAAGGGTGGCAGAGCGGCCGAATGCACCGGTCTTGAAAACCGGCGATGGGAAACCATCC
GTGGGTTCAAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
Tttattacat
Secondary structure (Cloverleaf model)
>w018939	Ser	TGA
                   C      GCCA Tttattacat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G T G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        A     CGATGGGAAACCATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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