The detailed information of tRNA gene sequence


Sequence ID>w018932
Genome IDAATS01000004
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 54893
End posion on genome 54821
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tgtttttttc
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGGAGAGCAACGGCCTTACAAGCCGTAGGTCGCAGGTTCGAAC
CCTGCAGCGCCCAcca
Downstream region at tRNA end position 
tttaagcccg
Secondary structure (Cloverleaf model)
>w018932	Val	TAC
                   c      Acca tttaagcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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