The detailed information of tRNA gene sequence


Sequence ID>w018929
Genome IDAATS01000003
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 293115
End posion on genome 293208
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgccttcaT
tRNA gene sequence 
GGAGAGGTATTCGAAGTGGTCATAACGGCACCGACTCGAAATCGGTTGGGGGCGAGAGTC
CCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
Tataaaaaaa
Secondary structure (Cloverleaf model)
>w018929	Ser	CGA
                   T      GCCA Tataaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T G A A        A      | | | | |     G
  G         G C T T       G T G G G     C
  G             + +                 T T
  T         A C G G
    C A T A        C     TGGGGGCGAGAGTCCCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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