The detailed information of tRNA gene sequence


Sequence ID>w018921
Genome IDAATS01000002
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 73062
End posion on genome 73140
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctcaataaaT
tRNA gene sequence 
CGGGACGTAGCGCAGTCTGGTAGCGCACACGGCTGGGGGCCGTGTGGTCGGAGGTTCGAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
Ttttctcaaa
Secondary structure (Cloverleaf model)
>w018921	Pro	GGG
                   T      ACCA Ttttctcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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