The detailed information of tRNA gene sequence


Sequence ID>w018919
Genome IDAATS01000001
Search identical group
Phylum/ClassZetaproteobacteria
SpeciesMariprofundus ferrooxydans PV-1 [AATS]
Start position on genome 16296
End posion on genome 16372
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgtccaacag
tRNA gene sequence 
GTCCCCATCGTCTAGTCGGCCTAGGACACCGCCCTTTCACGGCGGCAACACCGGTTCGAA
TCCGGTTGGGGACGCCA
Downstream region at tRNA end position 
aatttagcca
Secondary structure (Cloverleaf model)
>w018919	Glu	TTC
                   g      GCCA aatttagcca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G G C C     A
    C T G A        C      | | | | |     G
  G         T C T G       A C C G G     C
  G         + | | |                 T T
  C         G G A C
    C T A          A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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