The detailed information of tRNA gene sequence


Sequence ID>w018823
Genome IDAATQ01000028
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSalipiger bermudensis HTCC2601 [AATQ]
Start position on genome 22876
End posion on genome 22954
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggagcctgT
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCGTCTGTTTTGGGTACAGAAGGTCGTGAGTTCGAA
TCTCGCCGCCCCGACCA
Downstream region at tRNA end position 
Ctttcctcac
Secondary structure (Cloverleaf model)
>w018823	Pro	TGG
                   T      ACCA Ctttcctcac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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