The detailed information of tRNA gene sequence


Sequence ID>w018548
Genome IDAATI01000072
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 16372
End posion on genome 16463
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaccccacta
tRNA gene sequence 
GGGAAGGTGGCAGAGTCCGGTTGAATGTACCGCCCTCGAAATGCGGCAAGGTGTAAAAAC
CTTCGTGGGTTCGAATCCCACCCTTCCCGCCA
Downstream region at tRNA end position 
ccaacatggc
Secondary structure (Cloverleaf model)
>w018548	Ser	CGA
                   a      GCCA ccaacatggc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G           | | +                 T T
  G         A T G T
    T T G A        A     CAAGGTGTAAAAACCTTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C   T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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