The detailed information of tRNA gene sequence


Sequence ID>w018545
Genome IDAATI01000069
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 29333
End posion on genome 29256
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaatcagaT
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCGTCTCGTTTACACCGAGTAGGTCGGGGGTTCGAGT
CCCTCATCACCCACCA
Downstream region at tRNA end position 
Atgccacttt
Secondary structure (Cloverleaf model)
>w018545	Val	TAC
                   T      ACCA Atgccacttt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    T   T
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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