The detailed information of tRNA gene sequence


Sequence ID>w018543
Genome IDAATI01000067
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 30469
End posion on genome 30398
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cccgcctgtt
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGTGGTCTGCAAAACCGCGATCCATGGGTTCGAATC
CCATTGTCGCCTcca
Downstream region at tRNA end position 
aacgcgcaaa
Secondary structure (Cloverleaf model)
>w018543	Cys	GCA
                   t      Tcca aacgcgcaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     T A C C C     A
        G A        A      | | | | |     G
      T     A C C G       A T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATCC
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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