The detailed information of tRNA gene sequence


Sequence ID>w018541
Genome IDAATI01000061
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 11768
End posion on genome 11843
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
accgacaagc
tRNA gene sequence 
GGGGGCGTAGCTCACCTGGTAGAGCGCGACAATCGCACTGTCGAGGTAAGGGGTTCGAGT
CCCCTCGCCTCCACCA
Downstream region at tRNA end position 
acttgcttgg
Secondary structure (Cloverleaf model)
>w018541	Ala	CGC
                   c      ACCA acttgcttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C C C C     A
      C C A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTA
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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