The detailed information of tRNA gene sequence


Sequence ID>w018540
Genome IDAATI01000058
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 20639
End posion on genome 20724
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
caaaaaaagc
tRNA gene sequence 
GGGTAGGTACCAGAGTGGCCAAATGGGGCGGACTGTAAATCCGCTGGCTTACGCCTACGG
GGGTTCGAATCCCTCCCTGCCCACCA
Downstream region at tRNA end position 
atttgttttc
Secondary structure (Cloverleaf model)
>w018540	Tyr	GTA
                   c      ACCA atttgttttc
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       G A C C       G G G G G     C
    G         | | |                 T T
    C       A T G G
      C A A        G     TGGCTTACGCCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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