The detailed information of tRNA gene sequence


Sequence ID>w018536
Genome IDAATI01000036
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 47708
End posion on genome 47637
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cataggtcaa
tRNA gene sequence 
CGCGGGGTGGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCGAATC
CTCTCCCCGCAAcca
Downstream region at tRNA end position 
caactaaaga
Secondary structure (Cloverleaf model)
>w018536	Met	CAT
                   a      Acca caactaaaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
        G A        G      | | | | |     G
      T     C G A G       A G A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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