The detailed information of tRNA gene sequence


Sequence ID>w018535
Genome IDAATI01000033
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 25673
End posion on genome 25602
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaccagcga
tRNA gene sequence 
AGGGGTGTAGGCTCAATGGTAAACCGCTGGTCTCCAAAACCGGATTTCAGGGTTCGAATC
CCTGCGCCCCTGcca
Downstream region at tRNA end position 
aacgctccat
Secondary structure (Cloverleaf model)
>w018535	Trp	CCA
                   a      Gcca aacgctccat
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     G T C C C     A
      A A C        A      | | | | |     G
    T       T C G G       C A G G G     C
    G       |   | |                 T T
    G       A A C C
      T A          G     ATTT
                    C - G
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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