The detailed information of tRNA gene sequence


Sequence ID>w018534
Genome IDAATI01000024
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 43482
End posion on genome 43557
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccggtgagca
tRNA gene sequence 
GGGCCATTAGCTCAACGGTTAGAGCACGCGGCTCATACCCGCTTGGTTGGGGGTTCGAAT
CCCTCATGGCCCACCA
Downstream region at tRNA end position 
tcaatcccct
Secondary structure (Cloverleaf model)
>w018534	Met	CAT
                   a      ACCA tcaatcccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTT
                    C   T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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