The detailed information of tRNA gene sequence


Sequence ID>w018530
Genome IDAATI01000015
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 67092
End posion on genome 67019
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tcaattacta
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGATAGAGCATCGGTCTTCTAAACCGACGGTCGTGGGTTCGAG
TCCCGCCGTCCGTGcca
Downstream region at tRNA end position 
ctttccccat
Secondary structure (Cloverleaf model)
>w018530	Arg	TCT
                   a      Gcca ctttccccat
                     G + T
                     C - G
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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