The detailed information of tRNA gene sequence


Sequence ID>w018521
Genome IDAATI01000005
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 20298
End posion on genome 20222
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tataaatatG
tRNA gene sequence 
GTGGCTGTAGCTCAATGGCAGAGCGCCTCACTGTGGCTGAGGATGTTGAGGGTTCGAGCC
CCTTCAGCCACCCCA
Downstream region at tRNA end position 
Cagaagcaaa
Secondary structure (Cloverleaf model)
>w018521	His	GTG
                   G      CCCA Cagaagcaaa
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          C G
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     ATGTT
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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