The detailed information of tRNA gene sequence


Sequence ID>w018520
Genome IDAATI01000003
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 58543
End posion on genome 58466
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
tatagacgtT
tRNA gene sequence 
GCGACCGTAGCTCAGTGGATAGAGCATTGGTCTTCGGAACCAAGTGTCGGGGGTTCGAGT
CCCTCCGGTCGCGCCA
Downstream region at tRNA end position 
Atcacaccta
Secondary structure (Cloverleaf model)
>w018520	Arg	TCG
                   T      GCCA Atcacaccta
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     GTGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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