The detailed information of tRNA gene sequence


Sequence ID>w018519
Genome IDAATI01000003
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon aurantiacus ATCC 23779 [AATI]
Start position on genome 119376
End posion on genome 119453
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcgcacatcA
tRNA gene sequence 
GCCGATGTAGCTCAGTTGGCAGAGCAACTGTTTCGTAAATAGTAGGTCACGAGTTCAAGT
CTCGTCATCGGCTCCA
Downstream region at tRNA end position 
Ttcaatcact
Secondary structure (Cloverleaf model)
>w018519	Thr	CGT
                   A      TCCA Ttcaatcact
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G A G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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