The detailed information of tRNA gene sequence


Sequence ID>w016711
Genome IDAAQN01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzicola BLS256 [AAQN]
Start position on genome 1842097
End posion on genome 1842175
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcagcatatT
tRNA gene sequence 
CGGGGTATAGCGCAGCCTGGTAGCGCACTAGTCTGGGGGACTAGTGGTCGTCGGTTCGAA
TCCGGCTACCCCGACCA
Downstream region at tRNA end position 
Aaacatcaag
Secondary structure (Cloverleaf model)
>w016711	Pro	GGG
                   T      ACCA Aaacatcaag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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