The detailed information of tRNA gene sequence


Sequence ID>w016692
Genome IDAAQN01000001
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzicola BLS256 [AAQN]
Start position on genome 219918
End posion on genome 219995
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
agtccctttT
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGATC
CCGACAGGCTCCACCA
Downstream region at tRNA end position 
Tattgagtga
Secondary structure (Cloverleaf model)
>w016692	Ala	TGC
                   T      ACCA Tattgagtga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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