The detailed information of tRNA gene sequence


Sequence ID>w016097
Genome IDAAPV01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC1002 [AAPV]
Start position on genome 125414
End posion on genome 125500
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aatagtacaT
tRNA gene sequence 
GCCCTCGTGGTGAAATTGGTAGACACAACGGACTTAAAATCCGTGCCTTTTTGGAGTGCC
AGTTCGAGTCTGGCCGAGGGCACCA
Downstream region at tRNA end position 
Ctaaatgaga
Secondary structure (Cloverleaf model)
>w016097	Leu	TAA
                   T      ACCA Ctaaatgaga
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C G G T C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C A G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     GCCTTTTTGGAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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