The detailed information of tRNA gene sequence


Sequence ID>w016094
Genome IDAAPV01000001
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique HTCC1002 [AAPV]
Start position on genome 53673
End posion on genome 53596
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgcttgtttT
tRNA gene sequence 
GGGCGGTTAGCTCAGTTGGTAGAGCATCTCGTTTACACCGAGGGGGTCAAAGGTTCGAGT
CCTTTACTGCCCACCA
Downstream region at tRNA end position 
Aaacaactaa
Secondary structure (Cloverleaf model)
>w016094	Val	TAC
                   T      ACCA Aaacaactaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          T G
                    T     T T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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