The detailed information of tRNA gene sequence


Sequence ID>w014032
Genome IDAAOD01000004
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAlteromonas mediterranea 'Deep ecotype' [AAOD]
Start position on genome 123455
End posion on genome 123372
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atctatctac
tRNA gene sequence 
GCCAGAGTGATGAAATTGGTAGACATGACGGATTCAAAATCCGTTGCTAGAAATAGCGTG
CCGGTTCAAGTCCGGCCTCTGGTAcca
Downstream region at tRNA end position 
ttctcttttt
Secondary structure (Cloverleaf model)
>w014032	Leu	CAA
                   c      Acca ttctcttttt
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       A G T A       G C C G G     C
    G         | | |                 T T
    G       A C A T
      T A G        G     TGCTAGAAATAGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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