The detailed information of tRNA gene sequence


Sequence ID>w011972
Genome IDAALY01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseovarius nubinhibens ISM [AALY]
Start position on genome 83123
End posion on genome 83038
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ccgggaaagT
tRNA gene sequence 
GGGCGACAGGCCGCAAGGTGTGGCAGGGGACTGTAACTCCCTCGCGGAGACGCACGCCTG
GTTCGATTCCAGGGTCGCCCACCA
Downstream region at tRNA end position 
Ctttcccttc
Secondary structure (Cloverleaf model)
>w011972	Tyr	GTA
                   T      ACCA Ctttcccttc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G          T T
                    A     G G A C C     A
        A C        G      | | | | |     G
      A     G C C G       C C T G G     C
      G     + | | |                 T T
      G     T G G C
        T G        A     CGCGGAGACGCACG
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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