The detailed information of tRNA gene sequence


Sequence ID>C171000134
Genome IDAP017913
Search identical group
Phylum/ClassBacteroidota
SpeciesCandidatus Azobacteroides pseudotrichonymphae [AP017913, AP017914]
Start position on genome 381311
End posion on genome 381384
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctcatgtat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCGAAT
CTTGCCTCCGCAACtg
Downstream region at tRNA end position 
ttgatttata
Secondary structure (Cloverleaf model)
>C171000134	Met	CAT
                   t      ACtg ttgatttata
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | + | | |     G
    T       C G A G       G T A A G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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