The detailed information of tRNA gene sequence


Sequence ID>C171000770
Genome IDCP007223
Search identical group
Phylum/ClassThermotogota
SpeciesThermosipho sp. 1063 [CP007223]
Start position on genome 428979
End posion on genome 428903
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatatacga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGAAGCTCGTTGGGCTCATAACCCAAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
gaaaaaggtg
Secondary structure (Cloverleaf model)
>C171000770	Met	CAT
                   a      ACCA gaaaaaggtg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G A A        G     AGGCC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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