The detailed information of tRNA gene sequence


Sequence ID>C171002164
Genome IDCP009259
Search identical group
Phylum/ClassCampylobacterota
SpeciesHelicobacter pylori SS1 [CP009259]
Start position on genome 688461
End posion on genome 688537
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attagcgtgt
tRNA gene sequence 
CGCGGAGTAGAGCAGTCCGGTAGCTCGTTGGGCTCATAACCCAAAGGTCAGTGGTTCAAA
TCCATTCTCCGCAACCA
Downstream region at tRNA end position 
atctcttttt
Secondary structure (Cloverleaf model)
>C171002164	Met	CAT
                   t      ACCA atctcttttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | + | | |     A
    C       C G A G       A G T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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