The detailed information of tRNA gene sequence


Sequence ID>C171030401
Genome IDCP014168
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas panacis DCY99 [CP014168]
Start position on genome 3798243
End posion on genome 3798167
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgatgacga
tRNA gene sequence 
GGCGAAGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCAAG
TCCCTCCTTCGCTACCA
Downstream region at tRNA end position 
tcgttcacaa
Secondary structure (Cloverleaf model)
>C171030401	Met	CAT
                   a      ACCA tcgttcacaa
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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