The detailed information of tRNA gene sequence


Sequence ID>C171049905
Genome IDCP016456
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingobium sp. RAC03 [CP016456]
Start position on genome 127499
End posion on genome 127424
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgttcaggtg
tRNA gene sequence 
GGGCCTGTAGCTCAACGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGATT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
tggattgctt
Secondary structure (Cloverleaf model)
>C171049905	Met	CAT
                   g      ACCA tggattgctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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