The detailed information of tRNA gene sequence


Sequence ID>C171060623
Genome IDCP017311
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesHydrogenophaga sp. PBC [CP017311]
Start position on genome 3273722
End posion on genome 3273635
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttttgcgcg
tRNA gene sequence 
GGGCCGGACGCCGTGTTGGTTGCAGGCAGCGGACTCATAATCCGCCGGAGAAATCCCATC
CTCGGTTCGAATCCGAGTCGGCCCACCA
Downstream region at tRNA end position 
agcgcagatg
Secondary structure (Cloverleaf model)
>C171060623	Met	CAT
                   g      ACCA agcgcagatg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T          T A
                    A     G A G C C     A
    T T G T        C      | | | | |     G
  G         G C C G       C T C G G     C
  G           | | |                 T T
  T         A G G C
    T G C          A     CGGAGAAATCCCATC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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