The detailed information of tRNA gene sequence


Sequence ID>C171065600
Genome IDCP017668
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesJeongeupia sp. USM3 [CP017668]
Start position on genome 1479221
End posion on genome 1479145
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtcagtacac
tRNA gene sequence 
GGGCCTTTAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTGGGTTCGAG
CCCCACAGGGCCCACCA
Downstream region at tRNA end position 
gaaattccag
Secondary structure (Cloverleaf model)
>C171065600	Met	CAT
                   c      ACCA gaaattccag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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