The detailed information of tRNA gene sequence


Sequence ID>C171072770
Genome IDCP018099
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 LF13 [CP018099]
Start position on genome 3108615
End posion on genome 3108539
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtaataacg
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCGGCCGACTCATAATCGGCTGGTCCGGGGTTCGAG
TCCCTGTGGGCCCACTA
Downstream region at tRNA end position 
aaataaaaag
Secondary structure (Cloverleaf model)
>C171072770	Met	CAT
                   g      ACTA aaataaaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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