The detailed information of tRNA gene sequence


Sequence ID>C171074094
Genome IDCP018154
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingorhabdus lutea LPB0140 [CP018154]
Start position on genome 1662194
End posion on genome 1662118
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcactcgtgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTCGGGGGTTCGAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
cttatataat
Secondary structure (Cloverleaf model)
>C171074094	Met	CAT
                   t      ACCA cttatataat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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