The detailed information of tRNA gene sequence


Sequence ID>C171083835
Genome IDCP018787
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOxalobacter formigenes HC-1 [CP018787]
Start position on genome 2092329
End posion on genome 2092253
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctttttttat
tRNA gene sequence 
GTGCCGGTAGCTCAAGTGGTAAGAGCTTCAAACTCATAATTTGACGGCTGATGGTTCAAA
TCCATCCCGGCATACCA
Downstream region at tRNA end position 
attcaaacat
Secondary structure (Cloverleaf model)
>C171083835	Met	CAT
                   t      ACCA attcaaacat
                     G + T
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T A C C     A
      G A A        A      | | | | |     A
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A A        T     CGGCT
                    T - A
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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