The detailed information of tRNA gene sequence


Sequence ID>C171084780
Genome IDCP018820
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas koreensis ABOJV [CP018820]
Start position on genome 2763460
End posion on genome 2763536
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggggcgctgg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCAAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
gcggcatgtg
Secondary structure (Cloverleaf model)
>C171084780	Met	CAT
                   g      ACCA gcggcatgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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