The detailed information of tRNA gene sequence


Sequence ID>C171097305
Genome IDCP019628
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoalteromonas aliena EH1 [CP019628]
Start position on genome 4323642
End posion on genome 4323718
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caaaaaagat
tRNA gene sequence 
GGCTAAGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCAAA
TCCCGTCTTAGCCACCA
Downstream region at tRNA end position 
tattttttgt
Secondary structure (Cloverleaf model)
>C171097305	Met	CAT
                   t      ACCA tattttttgt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     G - C          T A
                    T     T G C C C     A
      C G A        A      | |   | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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