The detailed information of tRNA gene sequence


Sequence ID>C171097453
Genome IDCP019630
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRoseibium aggregatum RMAR6-6 [CP019630]
Start position on genome 4388719
End posion on genome 4388795
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccctgccgt
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCCGTCCGCTCATAACGGATTGGTTGGGGGTTCGAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
ctccactttc
Secondary structure (Cloverleaf model)
>C171097453	Met	CAT
                   t      ACCA ctccactttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G + T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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