The detailed information of tRNA gene sequence


Sequence ID>C171097747
Genome IDCP019646
Search identical group
Phylum/ClassPlanctomycetota
SpeciesLimihaloglobus sulfuriphilus SM-Chi-D1 [CP019646]
Start position on genome 105047
End posion on genome 104974
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgagactttc
tRNA gene sequence 
GGCGGTGTAGCTCAGTTGGTTAGAGCGTGGGATTCATAAGCCTAAGGTCGGTGGTTCAAA
TCCACCCGCCGCTAttc
Downstream region at tRNA end position 
tctgaatata
Secondary structure (Cloverleaf model)
>C171097747	Met	CAT
                   c      Attc tctgaatata
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G + T
                    G - C
                    G - C
                    A   G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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