The detailed information of tRNA gene sequence


Sequence ID>C171103238
Genome IDCP020046
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesThiomonas intermedia ATCC 15466 [CP020046]
Start position on genome 934107
End posion on genome 934183
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgtcattc
tRNA gene sequence 
GGGCCGTTAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGTTGGTTCAAG
TCCAACACGGCCTACCA
Downstream region at tRNA end position 
aataccctgc
Secondary structure (Cloverleaf model)
>C171103238	Met	CAT
                   c      ACCA aataccctgc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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