The detailed information of tRNA gene sequence


Sequence ID>C171105238
Genome IDCP020351
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas amygdali pv. lachrymans NM002 [CP020351]
Start position on genome 5450803
End posion on genome 5450879
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcctactga
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG
TCCGTGTGGGCCCACCA
Downstream region at tRNA end position 
cttttgaaag
Secondary structure (Cloverleaf model)
>C171105238	Met	CAT
                   a      ACCA cttttgaaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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