The detailed information of tRNA gene sequence


Sequence ID>C171105858
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 1232804
End posion on genome 1232878
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
actccttcct
tRNA gene sequence 
GGCGTGGTAGCTCAGCTGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGAGAGTTCAAG
TCTCTCCCACGCCACtt
Downstream region at tRNA end position 
ccccagtgcc
Secondary structure (Cloverleaf model)
>C171105858	Met	CAT
                   t      ACtt ccccagtgcc
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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