The detailed information of tRNA gene sequence


Sequence ID>C171105863
Genome IDCP020382
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermaceae bacterium RA [CP020382]
Start position on genome 1949950
End posion on genome 1950025
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcctacat
tRNA gene sequence 
CGCGGGGTGGAGAAGCTGGTATCTCATCGGGCTCATAACCCGAAGGTCGCGGGTTCAAAT
CCCGCCCCCGCTACCA
Downstream region at tRNA end position 
cgaaagccga
Secondary structure (Cloverleaf model)
>C171105863	Met	CAT
                   t      ACCA cgaaagccga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    T       A G A G       G C G G G     C
    G       | | | |                 T T
    G       T C T C
      T A          A     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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