The detailed information of tRNA gene sequence


Sequence ID>C171109020
Genome IDCP020554
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesParasaccharibacter apium G7_7_3c [CP020554]
Start position on genome 1057587
End posion on genome 1057512
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatgtctgT
tRNA gene sequence 
GCGCCTGTAGCTCAATTGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAG
TCCTGCCGGGCGCAGgt
Downstream region at tRNA end position 
gacgcctcca
Secondary structure (Cloverleaf model)
>C171109020	Met	CAT
                   T      AGgt gacgcctcca
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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